Forms
- Free Software For Mac Downloads
- Software For Mac Free
- Zen Microscope Software For Mac Os
- Free Digital Microscope Software
- Software For Mac Computers
- Zen Microscope Software For Mac
Leica Tps Data Download Software Mac Download CellProfiler: Free, open-source software from the Broad Institute for segmentation and quantitative analysis of microscope image data. Ilastik: Free software that uses machine learning for interactive object recognition and segmentation. Creative Zen Microphoto free download - Creative WebCam Pro eX Drivers, Creative Labs Sound Blaster 16/32/AWE Drivers, Creative WebCam Live Pro, and many more programs.
Registration forms for the CIF platform
CIF > Imaris satellite license request form
24 downloads156.10 KB
CIF Registration Form
141 downloads245.21 KB
Guides and Manuals
Documents written by the CIF staff or official manuals to operate our instruments.
CIF Guides
[All] Use of the Airyscan module on the Zeiss LSM 780-880 series
How to correctly setup the Airyscan mode on Zeiss confocals for super-resolution. Written by Yannick Krempp
28 downloads870.79 KB
[Bugnon] Zeiss LSM 780 User Manual
Short user manual written by Yannick Krempp
27 downloads3.96 MB
[Bugnon] Zeiss LSM 710 User Manual
Short user manual written by Yannick Krempp
18 downloads0.00 KB
[All] Zeiss Zen Multitrack setup for faster and cleaner acquisitions
How to correctly setup multitrack channels using Zen on Zeiss confocals [710-780-880 series].
Written by Yannick Krempp
13 downloads1.87 MB
[Bugnon] Leica DMi8 User Guide
Short user manual written by Yannick Krempp
21 downloads2.22 MB
Official Manuals
[All] Zeiss LSM 710,780 User Manual
Official Zeiss Manual
12 downloads6.66 MB
[Bugnon] Leica DMi8 Manual
Official Leica Manual
6 downloads3.97 MB
Free Software
Free versions of commercial software and open-source packages used for image processing and analysis.
Commercial Packages
Brand | Software | OS | Download page |
---|---|---|---|
Zeiss | Zen Lite | Zen Blue Edition 3.1 | Windows | https://www.zeiss.com/microscopy/int/products/microscope-software/zen.html |
Leica | LAS X Core Offline | Windows | https://webshare.leica-microsystems.com/latest/core/lifescience/ |
Nikon | NIS Elements Viewer | Windows, Mac OS X | https://www.microscope.healthcare.nikon.com/en_EU/products/software/nis-elements/viewer |
Hammamatsu | NDP.View2 | Windows, Mac OS X | https://www.hamamatsu.com/eu/en/product/type/U12388-01/index.html (Scroll down for links) |
Various (Adobe, Microsoft, Matlab,…) for academic UNIL users only | Creative Cloud, Office, Matlab | Windows | https://www.unil.ch/ci/distrisoft |
Open-source or Freeware Packages
Author(s) | Software | OS | Download page |
---|---|---|---|
Eliceiri/LOCI group at the University of Wisconsin-Madison, and the Jug and Tomancak labs at the MPI-CBG in Dresden. | Fiji (Image J + plugins) | Windows, Mac OS X, Linux | http://fiji.sc/ |
QuPath is developed at the University of Edinburgh. The software was originally created at the Centre for Cancer Research & Cell Biology at Queen’s University Belfast, as part of research projects funded by Invest Northern Ireland and Cancer Research UK. | QuPath | Windows, Mac OS X, Linux | https://qupath.github.io/ |
The CellProfiler project team is based in the Carpenter Lab at the Broad Institute of Harvard and MIT. The project was started in 2003 by Anne E. Carpenter and Thouis (Ray) Jones in the Sabatini Laboratory (Whitehead Institute for Biomedical Research) and Golland laboratory (MIT’s CSAIL) and is actively improved and maintained. | CellProfiler, Cellprofiler Analyst | Windows, Mac OS X | https://cellprofiler.org/releases/ |
Orbit has been developed at Actelion Pharmaceuticals Ltd, now Idorsia Pharmaceuticals Ltd by Manuel Stritt. | Orbit | Windows, Mac OS X, Linux | http://www.orbit.bio/download/ |
KNIME’s headquarters are based in Zurich, with additional offices in Konstanz, Berlin, and Austin. We’re open for innovation®, so visit us at KNIME. | KNIME Analytics | Windows, Mac OS X, Linux | https://www.knime.com/downloads/download-knime |
Newsletter
The CIF platform edits a yearly newsletter. Find here all the previous issues.
Newsletter - November 2019
3 downloads1.31 MB
Free Software For Mac Downloads
Newsletter - June 2018
0 downloads5.87 MB
Plugins, macros and scripts
Software For Mac Free
Plugins, macros and scripts written in various languages (java, python, macro) for extensible software like Fiji
Workshops
Workshop-related documents like slides, outlines or samples.
Live Cell Imaging [Florence Morgenthaler, Luigi Bozzo, 2019]
Critical steps and applications for live cell imaging in widefield & spinning disk confocal microscopy
4 downloads5.17 MB
F-Techniques [Luigi Bozzo, 2019]
Slides of the presentation given by Luigi Bozzo on the various advanced F-Techniques : FRAP, FCS, FRET, FLIM, principle and application.
10 downloads3.60 MB
Using HRM for batch deconvolution [2019, Yannick KREMPP]
Slides of the presentation given by Yannick Krempp on how to use the Huygens remote manager implemented at the CIF to do batch deconvolution.
6 downloads7.87 MB
Deconvolution [2019, Arnaud Paradis]
Zen Microscope Software For Mac Os
Slides from the CIF workshop given by Arnaud Paradis on Deconvolution
12 downloads1.84 MB
Fiji: ImageJ plus a large bundle of plugins, all packaged together in one easy-to-download application. Runs on Mac OS, Windows, and Linux. Very handy for new users who don't want to download individual plugins. Includes utilities for 3D viewing, video editing, measuring colocalization among others. Recommended for all CDB Micro Core users.
VLC: VLC media player is a free and cross-platform multimedia player that plays most multimedia files as well as DVDs, Audio CDs, VCDs, and various streaming protocols. It's absolutely necessary for playing videos created using our Core's version of Arivis Vision4D at the Lightsheet workstation.
CellProfiler: Free, open-source software from the Broad Institute for segmentation and quantitative analysis of microscope image data.
Ilastik: Free software that uses machine learning for interactive object recognition and segmentation.
Imaris File Converter: Free software to convert image files to .ims format. Do this before bringing data to the Core's workstations — it will save you time!
Free Digital Microscope Software
Imaris Viewer: A free version of Imaris with limited capabilities; useful for quickly viewing Imaris files or raw data.
Software For Mac Computers
ZEN Lite : Free software from Zeiss to open .czi files. Windows only.
Zen Microscope Software For Mac
LAS X Core: Free software from Leica to open images acquired on the Leica SP8 confocal or any microscope controlled by LAS X. Scroll down the linked page to find the version appropriate to your operating system. Windows only.